E Eising, SMH Huisman, AMETA Mahfouz, LS Vijfhuizen, V Anttila, BS Winsvold, TKM Arfan Ikram, T Freilinger, J Kaprio, DI Boomsma, CM van Duijn, MRR Jarvelin, JA Zwart, L Quaye, DP Strachan, C Kubisch, M Dichgans, GD Smith, K Stefansson, A Palotie, DI Chasman, MD Ferrari, GM Terwindt, B de Vries, DR Nyholt, BPF Lelieveldt, AMJM van den Maagdenberg, MJT Reinders (2016), Gene co-expression analysis identifies brain regions and cell types involved in migraine pathophysiology: A GWAS-based study using the Allen Human Brain Atlas, In Human Genetics Volume 135 p.425-439.

Ahmed Mahfouz, Boudewijn Lelieveldt, Aldo Grefhorst, Lisa T.C.M. van Weert, Isabel M. Mol, Hetty C.M. Sips, José K. van den Heuvel, Nicole A. Datson, Jenny A. Visser, Marcel Reinders, Onno C. Meijer (2016), Genome-wide coexpression of steroid receptors in the mouse brain: Identifying signaling pathways and functionally coordinated regions , In Proceedings of the National Academy of Sciences of the United States of America Volume 113 p.2738-2743.

Sjoerd Huisman, E Eising, Ahmed Mahfouz, Lisanne Vijfhuizen, Boudewijn Lelieveldt, AMJM van den Maagdenberg, Marcel Reinders (2016), Interpreting a migraine GWAS using gene expression in healthy human brain.

Ahmed Mahfouz, Nathalie Doorenweerd, Maaike van Putten, Rajaram Kaliyaperumal, PAC 't Hoen, J.J.G.M. (Jan) Verschuuren, EH (Erik) Niks, Marcel Reinders, HE (Hermien) Kan, Boudewijn Lelieveldt (2016), Longitudinal dystrophin gene expression from the fetal to adult human brain correlates with genes linked to autism spectrum disorders and intellectual disability.

Erdogan Taskesen, Sjoerd Huisman, Ahmed Mahfouz, Jesse Krijthe, Jeroen de Ridder, A. van de Stolpe, Erik van den Akker, Wim Verhaegh, Marcel Reinders (2016), Pan-cancer subtyping in a 2D-map shows substructures that are driven by specific combinations of molecular characteristics, In Scientific Reports Volume 6.

Ahmed Mahfouz, Sepideh Babaei, Marc Hulsman, Boudewijn P.F. Lelieveldt, Jeroen de Ridder, Marcel Reinders (2015), Chromatin interactions predict co-expression in the mouse cortex.

Ahmed Mahfouz, Boudewijn Lelieveldt, Aldo Grefhorst, Isabel M. Mol, Hetty C.M. Sips, José K. van den Heuvel, Jenny A. Visser, Marcel Reinders, Onno C. Meijer, More Authors (2015), Genome-wide coexpression of steroid receptors in the mouse brain: identifying signaling pathways and functionally coordinated regions.

S Babaei, AMETA Mahfouz, M Hulsman, BPF Lelieveldt, J de Ridder, MJT Reinders (2015), Hi-C chromatin interaction networks predict co-expression in the mouse cortex, In PLoS Computational Biology (Print) Volume 11 p.1-21.

AMETA Mahfouz, MN Ziats, OM Rennert, BPF Lelieveldt, MJT Reinders (2015), Shared pathways among autism candidate genes determined by co-expression network analysis of the developing human brain transcriptome, In Journal of Molecular Neuroscience Volume 57 p.580-594.

AMETA Mahfouz, M van de Giessen, LJP van der Maaten, SMH Huisman, MJT Reinders, MJ Hawrylycz, BPF Lelieveldt (2015), Visualizing the spatial gene expression organization in the brain through non-linear similarity embeddings, In Methods Volume 73 p.79-89.