Jeroen de Ridder, Jan Bot, Jaap Kool, Anthony Uren, Lodewyk Wessels, Marcel Reinders (2009), Discovering cancer pathways: by inferring combinatorial association logic.

RJP van Berlo, MJL de Groot, MJT Reinders, D de Ridder (2009), Efficient calculation of compound similarity based on maximum common subgraphs and its application to prediction of gene transcript levels, Delft University of Technology, Faculteit Elektrotechniek, Wiskunde en Informatica Volume ICT Group Technical Report Series.

M Hulsman, MJT Reinders, D de Ridder (2009), Evolutionary optimization of kernel weights improves protein complex comebership prediction, In IEEE - ACM Transactions on Computational Biology and Bioinformatics Volume 6 p.427-437.

M Clements, AP de Vries, MJT Reinders (2009), Exploiting Positive and Negative Graded Relevance Assessments for Content Recommendation, In Lecture Notes in Computer Science Volume 5427 p.155-166.

MH van Vliet, LFA Wessels, MJT Reinders (2009), Knowledge driven decomposition of tumor expression profiles, In BMC Bioinformatics Volume 10 p.1-12.

Bastiaan van den Berg, Marcel Reinders, Domenico Bellomo (2009), Logic gene network design: a software tool based on modularity and standardization, NBIC Conference 2009.

MJL de Groot, RJP van Berlo, WA van Winden, PJT Verheijen, MJT Reinders, D de Ridder (2009), Metabolite and reaction inference based on enzyme specificities, In Bioinformatics Volume 25 p.2975-2982.

JF Lichtenauer, GA ten Holt, MJT Reinders, EA Hendriks (2009), Person independent 3D sign language recognition, In Lecture Notes in Computer Science Volume 5085.

J Wang, M Clements, J. Yang, AP de Vries, MJT Reinders (2009), Personalization of tagging systems, In Information Processing & Management Volume 46 p.58-70.

J Wang, JA Pouwelse, JE Fokker, AP de Vries, MJT Reinders (2009), Personalization on a peer-to-peer television system, B Furht (Eds.), In Handbook of Multimedia for Digital Entertainment and Arts p.1-25, Springer.