J de Ridder, A Gerrits, JJ Bot, G de Haan, MJT Reinders, LFA Wessels (2010), Inferring combinatorial association logic networks in multimodal genome-wide screens, In Bioinformatics Volume 26 p.149-157.

J Kool, A.G. Uren, CP Martins, D. Sie, J de Ridder, G Turner, MJG van Uitert, K. Matentzoglu, W. Lagcher, P Krimpenfort, J Gadiot, C Pritchard, J Lenz, AH Lund, J Jonkers, J. Rogers, D.J. Adams, LFA Wessels, A Berns, M. van Lohuizen (2010), Insertional Mutagenesis in Mice Deficient for p15Ink4b, p16Ink4a, p21Cip1, and p27Kip1 Reveals Cancer Gene Interactions and Correlations with Tumor Phenotypes, In Cancer Research Volume 70 p.520-531.

HM Horlings, C Lai, DSA Nuyten, H Halfwerk, P Kristel, E van Beers, SA Joosse, CN Klijn, PM Nederhof, MJT Reinders, LFA Wessels, Marc J van de Vijver (2010), Integration of DNA copy number alterations and prognostic gene expression signatures in breast cancer patients, In Clinical Cancer Research Volume 16 p.651-663.

J de Ronde, CN Klijn, H Holstege, MJT Reinders, J Jonkers, LFA Wessels (2010), KC-SMARTR: An R package for detection of statistically significant aberrations in multi-experiment aCGH data, In BMC Research Notes Volume 2010 p.1-6.

D Peric-Hupkes, W Meuleman, L Pagie, SWM Bruggeman, I Solovei, W Brugman, S Graf, P Flicek, M van Lohuizen, MJT Reinders, LFA Wessels, B van Steensel (2010), Molecular maps of the reorganization of genome-nuclear lamina interactions during differentation, In Cell Volume 38 p.603-613.

J Mattison, J Kool, A.G. Uren, J de Ridder, LFA Wessels, J Jonkers, GR Bignell, A Butler, AG Rust, M Brosch, CH Wilson, L van der Weyden, DA Largaespada, MA Stratton, PA Futreal, M. van Lohuizen, A Berns, LS Collier, T Hubbard, D.J. Adams (2010), Novel candidate cancer genes identified by a large-scale cross-species comparative oncogenomics approach, In Cancer Research Volume 70 p.883-895.

A Broeks, M Braaf Linde, LFA Wessels, Marc J van de Vijver, ML de Bruin, M Stovall, NS Russell, FE Leeuwen, LJ van 't Veer (2010), Radiation-associated breast tumors display a distinct gene expression profile., In International Journal of Radiation: Oncology - Biology - Physics Volume 76 p.540-547.

Sjoerd C. Bruin, Christiaan Klijn, Gerrit Jan Liefers, Linde M. Braaf, Simon A. Joosse, Eric H. Van Beers, Victor J. Verwaal, Hans Morreau, Lodewyk F. Wessels, Marie Louise F. Van Velthuysen, Rob A.E.M. Tollenaar, Laura J. Van't Veer (2010), Specific genomic aberrations in primary colorectal cancer are associated with liver metastases, In BMC Cancer Volume 10.

W Meuleman, J.Y.M.N. Engwegen, M-C.W. Gast, LFA Wessels, MJT Reinders (2009), Analysis of mass spectrometry data using sub-spectra, In BMC Genomics Volume 10 p.1-9.