Roy Straver, Marjan M. Weiss, Quinten Waisfisz, Erik A. Sistermans, Marcel Reinders (2017), WISExome: A within-sample comparison approach to detect copy number variations in whole exome sequencing data , In European Journal of Human Genetics Volume 25 p.1354-1363.

E Taskesen, MJT Reinders (2016), 2D Representation of Transcriptomes by t-SNE Exposes Relatedness between Human Tissues, In PLoS ONE Volume 11 p.1-6.

HMJ Sontrop, MJT Reinders, Perry D. Moerland (2016), Breast cancer subtype predictors revisited: From consensus to concordance?, In BMC Medical Genomics p.1-14.

Roy Straver, Cees B.M. Oudejans, Erik A. Sistermans, Marcel Reinders (2016), Calculating the fetal fraction for noninvasive prenatal testing based on genome-wide nucleosome profiles, In Prenatal Diagnosis Volume 36 p.614-621.

Walid M. Abdelmoula, Benjamin Balluff, Sonja Englert, Jouke Dijkstra, Marcel Reinders, Axel Walch, Liam A. McDonnell, Boudewijn Lelieveldt (2016), Data-driven identification of prognostic tumor subpopulations using spatially mapped t-SNE of mass spectrometry imaging data, In Proceedings of the National Academy of Sciences of the United States of America Volume 113 p.12244-12249.

Jaap Heringa, Marcel Reinders, Sanne Abeln, Jeroen De Ridder (2016), ECCB 2016: The 15th European Conference on Computational Biology, Bioinformatics Volume 32 p.i389-i392.

E Eising, SMH Huisman, AMETA Mahfouz, LS Vijfhuizen, V Anttila, BS Winsvold, TKM Arfan Ikram, T Freilinger, J Kaprio, DI Boomsma, CM van Duijn, MRR Jarvelin, JA Zwart, L Quaye, DP Strachan, C Kubisch, M Dichgans, GD Smith, K Stefansson, A Palotie, DI Chasman, MD Ferrari, GM Terwindt, B de Vries, DR Nyholt, BPF Lelieveldt, AMJM van den Maagdenberg, MJT Reinders (2016), Gene co-expression analysis identifies brain regions and cell types involved in migraine pathophysiology: A GWAS-based study using the Allen Human Brain Atlas, In Human Genetics Volume 135 p.425-439.

Ahmed Mahfouz, Boudewijn Lelieveldt, Aldo Grefhorst, Lisa T.C.M. van Weert, Isabel M. Mol, Hetty C.M. Sips, José K. van den Heuvel, Nicole A. Datson, Jenny A. Visser, Marcel Reinders, Onno C. Meijer (2016), Genome-wide coexpression of steroid receptors in the mouse brain: Identifying signaling pathways and functionally coordinated regions , In Proceedings of the National Academy of Sciences of the United States of America Volume 113 p.2738-2743.

Jetse Scholma, Gwenny Fuhler, Jos Joore, Marc Hulsman, Stefano Schivo, Alan F. List, Marcel Reinders, Maikel Peppelenbosch, Janine N. Post (2016), Improved intra-array and interarray normalization of peptide microarray phosphorylation for phosphorylome and kinome profiling by rational selection of relevant spots, In Scientific Reports p.1-13.

Sjoerd Huisman, E Eising, Ahmed Mahfouz, Lisanne Vijfhuizen, Boudewijn Lelieveldt, AMJM van den Maagdenberg, Marcel Reinders (2016), Interpreting a migraine GWAS using gene expression in healthy human brain.