Walid M. Abdelmoula, Benjamin Balluff, Sonja Englert, Jouke Dijkstra, Marcel Reinders, Axel Walch, Liam A. McDonnell, Boudewijn Lelieveldt (2016), Data-driven identification of prognostic tumor subpopulations using spatially mapped t-SNE of mass spectrometry imaging data, In Proceedings of the National Academy of Sciences of the United States of America Volume 113 p.12244-12249.

Jaap Heringa, Marcel Reinders, Sanne Abeln, Jeroen De Ridder (2016), ECCB 2016: The 15th European Conference on Computational Biology, Bioinformatics Volume 32 p.i389-i392.

E Eising, SMH Huisman, AMETA Mahfouz, LS Vijfhuizen, V Anttila, BS Winsvold, TKM Arfan Ikram, T Freilinger, J Kaprio, DI Boomsma, CM van Duijn, MRR Jarvelin, JA Zwart, L Quaye, DP Strachan, C Kubisch, M Dichgans, GD Smith, K Stefansson, A Palotie, DI Chasman, MD Ferrari, GM Terwindt, B de Vries, DR Nyholt, BPF Lelieveldt, AMJM van den Maagdenberg, MJT Reinders (2016), Gene co-expression analysis identifies brain regions and cell types involved in migraine pathophysiology: A GWAS-based study using the Allen Human Brain Atlas, In Human Genetics Volume 135 p.425-439.

Ahmed Mahfouz, Boudewijn Lelieveldt, Aldo Grefhorst, Lisa T.C.M. van Weert, Isabel M. Mol, Hetty C.M. Sips, José K. van den Heuvel, Nicole A. Datson, Jenny A. Visser, Marcel Reinders, Onno C. Meijer (2016), Genome-wide coexpression of steroid receptors in the mouse brain: Identifying signaling pathways and functionally coordinated regions , In Proceedings of the National Academy of Sciences of the United States of America Volume 113 p.2738-2743.

Jetse Scholma, Gwenny Fuhler, Jos Joore, Marc Hulsman, Stefano Schivo, Alan F. List, Marcel Reinders, Maikel Peppelenbosch, Janine N. Post (2016), Improved intra-array and interarray normalization of peptide microarray phosphorylation for phosphorylome and kinome profiling by rational selection of relevant spots, In Scientific Reports p.1-13.

Sjoerd Huisman, E Eising, Ahmed Mahfouz, Lisanne Vijfhuizen, Boudewijn Lelieveldt, AMJM van den Maagdenberg, Marcel Reinders (2016), Interpreting a migraine GWAS using gene expression in healthy human brain.

Thies Gehrmann, Jordi F. Pelkmans, Han A.B. Wösten, Robin Ohm, Anton Sonnenberg, Johan J.P. Baars, Marcel Reinders, Thomas Abeel (2016), Karyollele specific expression in Agaricus Bisporus.

Ahmed Mahfouz, Nathalie Doorenweerd, Maaike van Putten, Rajaram Kaliyaperumal, PAC 't Hoen, J.J.G.M. (Jan) Verschuuren, EH (Erik) Niks, Marcel Reinders, HE (Hermien) Kan, Boudewijn Lelieveldt (2016), Longitudinal dystrophin gene expression from the fetal to adult human brain correlates with genes linked to autism spectrum disorders and intellectual disability.

Erdogan Taskesen, Sjoerd Huisman, Ahmed Mahfouz, Jesse Krijthe, Jeroen de Ridder, A. van de Stolpe, Erik van den Akker, Wim Verhaegh, Marcel Reinders (2016), Pan-cancer subtyping in a 2D-map shows substructures that are driven by specific combinations of molecular characteristics, In Scientific Reports Volume 6.

Ewald van Dyk, M Hoogstraat, J ten Hoeve, Marcel Reinders, Lodewyk Wessels (2016), RUBIC identifies driver genes by detecting recurrent DNA copy number breaks, In Nature Communications p.1-10.