A. Margarida Teixeira, Ivone Vaz-Moreira, D. Calderon Franco, D.G. Weissbrodt, Sabina Purkrtova, Stanislav Gajdos, Giulia Dottorini, Per H. Nielsen, Leron Khalifa, Eddie Cytryn, Jan Bartacek, Célia M. Manaia (2023), Candidate biomarkers of antibiotic resistance for the monitoring of wastewater and the downstream environment, In Water Research Volume 247.

D. Calderon Franco, Mark C.M. van Loosdrecht, T.E.P.M.F. Abeel, D.G. Weissbrodt (2023), Catch me if you can: capturing microbial community transformation by extracellular DNA using Hi-C sequencing, In Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology Volume 116 p.667-685.

D. Calderon Franco, F. Corbera Rubio, M. Cuesta Sanz, Brent Pieterse, David de Ridder, Mark C.M. van Loosdrecht, D. van Halem, M. Laureni, D.G. Weissbrodt (2023), Microbiome, resistome and mobilome of chlorine-free drinking water treatment systems, In Water Research Volume 235.

Antonella Piaggio, Srilekha Mittapalli, David Calderon-Franco, David Weissbrodt, Jules van Lier, Merle de Kreuk, Ralph Lindeboom (2023), The fate of sulfamethoxazole and trimethoprim in a micro-aerated anaerobic membrane bioreactor and the occurrence of antibiotic resistance in the permeate, In Water Science and Technology Volume 88 p.2344-2363.

D. Calderon Franco (2023), Transfer dynamics of antibiotic resistance determinants across urban water systems: The free-floating genetic perspective, PhD Thesis Delft University of Technology.

D. Calderon Franco, Mark C.M. van Loosdrecht, T.E.P.M.F. Abeel, D.G. Weissbrodt (2022), Catch me if you can: Capturing extracellular DNA transformation in mixed cultures via Hi-C sequencing, 18th International Symposium on Microbial Ecology, Lausanne 2022.

D. Calderon Franco, R.G. Sarelse, S. Christou, M. Pronk, Mark C.M. van Loosdrecht, T.E.P.M.F. Abeel, D.G. Weissbrodt (2022), Metagenomic profiling and transfer dynamics of antibiotic resistance determinants in a full-scale granular sludge wastewater treatment plant, In Water Research Volume 219.

S. Pillay, D. Calderon Franco, A. Urhan, T.E.P.M.F. Abeel (2022), Metagenomic-based surveillance systems for antibiotic resistance in non-clinical settings, In Frontiers in Microbiology Volume 13.

D. Calderon Franco, Laura Orschler, Susanne Lackner, Shelesh Agrawal, D.G. Weissbrodt (2022), Monitoring SARS-CoV-2 in sewage: Toward sentinels with analytical accuracy, In Science of the Total Environment Volume 804.

Aleksandra Miłobedzka, Catarina Ferreira, Ivone Vaz-Moreira, D. Calderon Franco, Adrian Gorecki, Sabina Purkrtova, Jan Bartacek, Lukasz Dziewit, D.G. Weissbrodt, More Authors (2022), Monitoring antibiotic resistance genes in wastewater environments: The challenges of filling a gap in the One-Health cycle, In Journal of Hazardous Materials.