Ahmed Mahfouz, Nathalie Doorenweerd, Maaike van Putten, Rajaram Kaliyaperumal, PAC 't Hoen, J.J.G.M. (Jan) Verschuuren, EH (Erik) Niks, Marcel Reinders, HE (Hermien) Kan, Boudewijn Lelieveldt (2016), Longitudinal dystrophin gene expression from the fetal to adult human brain correlates with genes linked to autism spectrum disorders and intellectual disability.

Erdogan Taskesen, Sjoerd Huisman, Ahmed Mahfouz, Jesse Krijthe, Jeroen de Ridder, A. van de Stolpe, Erik van den Akker, Wim Verhaegh, Marcel Reinders (2016), Pan-cancer subtyping in a 2D-map shows substructures that are driven by specific combinations of molecular characteristics, In Scientific Reports Volume 6.

Ahmed Mahfouz, Sepideh Babaei, Marc Hulsman, Boudewijn P.F. Lelieveldt, Jeroen de Ridder, Marcel Reinders (2015), Chromatin interactions predict co-expression in the mouse cortex.

Ahmed Mahfouz, Boudewijn Lelieveldt, Aldo Grefhorst, Isabel M. Mol, Hetty C.M. Sips, José K. van den Heuvel, Jenny A. Visser, Marcel Reinders, Onno C. Meijer, More Authors (2015), Genome-wide coexpression of steroid receptors in the mouse brain: identifying signaling pathways and functionally coordinated regions.

S Babaei, AMETA Mahfouz, M Hulsman, BPF Lelieveldt, J de Ridder, MJT Reinders (2015), Hi-C chromatin interaction networks predict co-expression in the mouse cortex, In PLoS Computational Biology (Print) Volume 11 p.1-21.

AMETA Mahfouz, MN Ziats, OM Rennert, BPF Lelieveldt, MJT Reinders (2015), Shared pathways among autism candidate genes determined by co-expression network analysis of the developing human brain transcriptome, In Journal of Molecular Neuroscience Volume 57 p.580-594.

AMETA Mahfouz, M van de Giessen, LJP van der Maaten, SMH Huisman, MJT Reinders, MJ Hawrylycz, BPF Lelieveldt (2015), Visualizing the spatial gene expression organization in the brain through non-linear similarity embeddings, In Methods Volume 73 p.79-89.

AMETA Mahfouz, MN Ziats, OM Rennert, BPF Lelieveldt, MJT Reinders (2014), Genomic connectivity networks based on the BrainSpan atlas of the developing human brain, S Ourselin, MA Styner (Eds.), In Proceedings of SPIE 9034, Medical Imaging 2014: Image Processing, 90344G p.1-7, SPIE.

Ahmed Mahfouz, Mark Ziats, Owen Rennert, Boudewijn Lelieveldt, Marcel Reinders (2014), Genomic connectivity networks based on the BrainSpan atlas of the developing human brain, SPIE 9034, Medical Imaging 2014: Image Processing, 90344G, San Diego, CA, USA.

Ahmed Mahfouz, Mark N. Ziats, Owen M. Rennert, Boudewijn Lelieveldt, Marcel Reinders (2013), Co-expression Network Analysis of the Developing Human Brain Implicates Synaptogenesis and Mitochondrial Function as Central Mechanisms in Autism.