T.R.M. Abdelaal (2021), Single-cell Analysis from the perspective of how to Interact, Identify and Integrate cells, PhD Thesis Delft University of Technology.

Tamim Abdelaal, Paul de Raadt, Boudewijn P.F. Lelieveldt, Marcel J.T. Reinders, Ahmed Mahfouz (2020), SCHNEL: Scalable clustering of high dimensional single-cell data, In Bioinformatics (Oxford, England) Volume 36 p.i849-i856.

Tamim Abdelaal, Soufiane Mourragui, Ahmed Mahfouz, Marcel J.T. Reinders (2020), SpaGE: Spatial Gene Enhancement using scRNA-seq, In Nucleic Acids Research Volume 48.

Tamim Abdelaal, Lieke C.M. Michielsen, Davy Cats, Dylan Hoogduin, Hailiang Mei, Marcel J.T. Reinders, Ahmed Mahfouz (2019), A comparison of automatic cell identification methods for single-cell RNA sequencing data, In Genome biology Volume 20 p.1-19.

Tamim Abdelaal, Thomas Hollt, Vincent van Unen, Boudewijn P.F. Lelieveldt, Frits Koning, Marcel Reinders, Ahmed Mahfouz (2019), CyTOFmerge: integrating mass cytometry data across multiple panels, In Bioinformatics Volume 35 p.4063-4071.

Na Li, Vincent van Unen, Nannan Guo, Tamim Abdelaal, Antonios Somarakis, Jeroen Eggermont, A.M.E.T.A. Mahfouz, Susana M. Chuva de Sousa Lopes, Boudewijn P.F. Lelieveldt, Frits Koning (2019), Early-life compartmentalization of immune cells in human fetal tissues revealed by high-dimensional mass cytometry, In Frontiers in Immunology Volume 10 p.1-13.

Natasja L. De Vries, Vincent Van Unen, Marieke E. Ijsselsteijn, Tamim Abdelaal, Ruud Van Der Breggen, Arantza Farina Sarasqueta, Ahmed Mahfouz, Koen C.M.J. Peeters, Thomas Höllt, Boudewijn P.F. Lelieveldt, Frits Koning, Noel F.C.C. De Miranda (2019), High-dimensional cytometric analysis of colorectal cancer reveals novel mediators of antitumour immunity, In Gut Volume 69 (2020) p.691-703.

Na Li, Vincent van Unen, Tamim Abdelaal, Nannan Guo, Sofya A. Kasatskaya, Susana M. Chuva de Sousa Lopes, Thomas Höllt, Olga V. Britanova, Boudewijn P.F. Lelieveldt, More Authors (2019), Memory CD4⁺ T cells are generated in the human fetal intestine, In Nature Immunology Volume 20 p.301-312.

Tamim Abdelaal, Vincent van Unen, Thomas Höllt, Frits Koning, Marcel J.T. Reinders, Ahmed Mahfouz (2019), Predicting Cell Populations in Single Cell Mass Cytometry Data, In Cytometry Part A Volume 95 p.769-781.