Bastiaan van den Berg, Marcel Reinders, Domenico Bellomo (2009), Logic gene network design: a software tool based on modularity and standardization, NBIC Conference 2009.

Jeroen de Ridder, Marcel Reinders, Lodewyk Wessels (2008), Inference of logic networks from insertion and expression data.

Jeroen de Ridder, Lodewyk Wessels, Anthony Uren, Jaap Kool, Marcel Reinders (2006), Discovering cooperating oncogenes: by statistical analysis of Retroviral Insertional Mutagenesis Data.