Ernst Joachim Houtgast, Vlad-Mihai Sima, Koen Bertels, Zaid Al-Ars (2018), Hardware acceleration of BWA-MEM genomic short read mapping for longer read lengths, In Computational Biology and Chemistry Volume 75 p.54-64.

Mahroo Zandrahimi, Philippe Debaud, Armand Castillejo, Zaid Al-Ars (2018), Industrial Evaluation of Transition Fault Testing for Cost Effective Offline Adaptive Voltage Scaling, In Proceedings of the 2018 Design, Automation & Test in Europe Conference & Exhibition (DATE) p.289-292, IEEE.

Nagarajan Kathiresan, Rashid Al-Ali, Puthen Jithesh, Ganesan Narayanasamy, Zaid Al-Ars (2018), Porting and Benchmarking of BWAKIT Pipeline on OpenPOWER Architecture, Rio Yokota, Michèle Weiland, John Shalf, Sadaf Alam (Eds.), In High Performance Computing p.402-410, Springer.

Georgios Smaragdos, Georgios Chatzikonstantis, Rahul Kukreja, Harry Sidiropoulos, Dimitrios Rodopoulos, Ioannis Sourdis, Zaid Al-Ars, Christoforos Kachris, Dimitrios Soudris, Chris I. De Zeeuw, Christos Strydis (2017), BrainFrame: A node-level heterogeneous accelerator platform for neuron simulations, In Journal of Neural Engineering Volume 14 p.1-15.

Nauman Ahmed, Hamid Mushtaq, Koen Bertels, Zaid Al-Ars (2017), GPU Accelerated API for Alignment of Genomics Sequencing Data, X. Hu, C.R. Shyu, Y. Bromberg, J. Gao, Y. Gong, D. Korkin, I. Yoo, J.H. Zheng (Eds.), In 2017 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) p.510-515, IEEE.

Shanshan Ren, Koen Bertels, Zaid Al-Ars (2017), GPU-Accelerated GATK HaplotypeCaller with Load-Balanced Multi-Process Optimization, In 2017 IEEE 17th International Conference on BioInformatics and BioEngineering (BIBE) p.497-502, IEEE.

Ernst Houtgast, Vlad Sima, Zaid Al-Ars (2017), High Performance Streaming Smith-Waterman Implementation with Implicit Synchronization on Intel FPGA using OpenCL, In 2017 IEEE 17th International Conference on BioInformatics and BioEngineering (BIBE) p.492-496, IEEE.

Nauman Ahmed, Koen Bertels, Zaid Al-Ars (2017), Predictive Genome Analysis Using Partial DNA Sequencing Data, In 2017 IEEE 17th International Conference on BioInformatics and BioEngineering (BIBE) p.119-124, IEEE.

J.W. Peltenburg, Ahmad Hesam, Zaid Al-Ars (2017), Pushing Big Data into Accelerators: Can the JVM Saturate Our Hardware?, J.M. Kunkel, R. Yokota, M. Taufer, J. Shalf (Eds.), In High Performance Computing p.220-236, Springer.

Hamid Mushtaq, Frank Liu, Carlos Costa, Gang Liu, Peter Hofstee, Zaid Al-Ars (2017), SparkGA: A Spark Framework for Cost Effective, Fast and Accurate DNA Analysis at Scale, In ACM-BCB '17 Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics p.148-157, Association for Computing Machinery (ACM).