Shanshan Ren, Nauman Ahmed, Koen Bertels, Zaid Al-Ars (2019). GPU Accelerated Sequence Alignment with Trace-back for GATK HaplotypeCaller. BMC Genomics.


Shanshan Ren, Nauman Ahmed, Koen Bertels, Zaid Al-Ars (2018). An Efficient GPU-based de Bruijn Graph Construction Algorithm for Micro-Assembly. In 18th annual IEEE International Conference on BioInformatics and BioEngineering (BIBE 2018).

Ernst Houtgast, Vlad Sima, Koen Bertels, Zaid Al-Ars (2018). Comparative Analysis of System-Level Acceleration Techniques in Bioinformatics. In 2018 IEEE 18th International Conference on BioInformatics and BioEngineering (BIBE), 243-246.

Yehuda Naveh, Elham Kashefi, James R. Wootton, Koen Bertels (2018). Theoretical and practical aspects of verification of quantum computers. In Proceedings of the 2018 Design, Automation and Test in Europe Conference and Exhibition, DATE 2018, 721-730, Institute of Electrical and Electronics Engineers Inc..

Savvas Varsamopoulos, Ben Criger, Koen Bertels (2018). Decoding small surface codes with feedforward neural networks. Quantum Science and Technology 3 1-12.

Lei Xie, Hoang Anh Du Nguyen, Mottaqiallah Taouil, Said Hamdioui, Koen Bertels (2018). A Mapping Methodology of Boolean Logic Circuits on Memristor Crossbar. IEEE Transactions on Computer - Aided Design of Integrated Circuits and Systems 37 311-323.

Carmina García Almudever, Nader Khammassi, L. Hutin, M. Vinet, Masoud Babaie, Fabio Sebastiano, Edoardo Charbon, Koen Bertels (2018). Towards a Scalable Quantum Computer. In Proceedings - 2018 13th IEEE International Conference on Design and Technology of Integrated Systems In Nanoscale Era, DTIS 2018, IEEE.

Imran Ashraf, Nader Khammassi, Mottaqiallah Taouil, Koen Bertels (2018). Memory and Communication Profiling for Accelerator-Based Platforms. IEEE Transactions on Computers 67 934-948.

Jintao Yu, Razvan Nane, Imran Ashraf, Mottaqiallah Taouil, Said Hamdioui, Henk Corporaal, Koen Bertels (2018). Skeleton-based Synthesis Flow for Computation-In-Memory Architectures. IEEE Transactions on Emerging Topics in Computing PP 1-13.

Lingling Lao, Bert van Wee, Imran Ashraf, Hans van Someren, Nader Khammassi, Koen Bertels, Carmina García Almudever (Eds.) 2018. Mapping of Lattice Surgery-based Quantum Circuits on Surface Code Architectures, None.