Shanshan Ren, Koen Bertels, Zaid Al-Ars (2016), Exploration of Alternative GPU Implementations of the Pair-HMMs Forward Algorithm, In Proceedings 3rd International Workshop on High Performance Computing on Bioinformatics p.1-8.

Ernst Houtgast, Vlad Sima, Koen Bertels, Zaid Al-Ars (2016), GPU-Accelerated BWA-MEM Genomic Mapping Algorithm Using Adaptive Load Balancing, Frank Hannig, João M. P. Cardoso, Thilo Pionteck, Dietmar Fey, Wolfgang Schröder-Preikschat, Jürgen Teich (Eds.), In Proceedings - 29th International Conference on Architecture of Computing Systems, ARCS 2016 p.130-142, Springer.

Nauman Ahmed, VM Sima, Ernst Houtgast, Koen Bertels, Z Al-Ars (2016), Heterogeneous hardware/software acceleration of the BWA-MEM DNA alignment algorithm, D Marculescu, F Lim (Eds.), In Proceedings of the 2015 IEEE/ACM International Conference on Computer-Aided Design, ICCAD p.240-246, IEEE.

Lei Xie, Hoang Anh Du Nguyen, Mottaqiallah Taouil, Said Hamdioui, Koen Bertels, Mohammad Alfailakawi (2016), Non-Volatile Look-up Table Based FPGA Implementations, Rached Tourki (Eds.), In Proceedings , IEEE.

Adib Haron, Jintao Yu, Razvan Nane, Mottaqiallah Taouil, Said Hamdioui, Koen Bertels (2016), Parallel Matrix Multiplication on Memristor-Based Computation-in-Memory Architecture, In 2016 International Conference on High Performance Computing & Simulation (HPCS) p.759-766, IEEE.

Ernst Joachim Houtgast, Vlad-Mihai Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars (2016), Power-Efficiency Analysis of Accelerated BWA-MEM Implementations on Heterogeneous Computing Platforms, Peter Athanas, René Cumplido, Claudia Feregrino, Ron Sass (Eds.), In 2016 International Conference on ReConFigurable Computing and FPGAs (ReConFig) p.1-8, IEEE.

Ernst Houtgast, Vlad Sima, Giacomo Marchiori, Koen Bertels, Zaid Al-Ars (2016), Power-Efficient Accelerated Genomic Short Read Mapping on Heterogeneous Computing Platforms, 24th IEEE International Symposium on Field-Programmable Custom Computing Machines, FCCM 2016 p.1-1.

Jintao Yu, Razvan Nane, Adib Haron, Said Hamdioui, H Corporaal, Koen Bertels (2016), Skeleton-based design and simulation flow for Computation-in-Memory architectures, W. Zhao, C.A. Moritz (Eds.), In 2016 IEEE/ACM International Symposium on Nanoscale Architectures (NANOARCH) p.165-170, ACM.

Hoang Anh Du Nguyen, Lei Xie, Mottaqiallah Taouil, Said Hamdioui, Koen Bertels (2016), Synthesizing HDL to Memristor Technology: A Generic Framework, W. Zhao, C.A. Moritz (Eds.), In 2016 IEEE/ACM International Symposium on Nanoscale Architectures (NANOARCH) p.43-48, ACM.

Valery Kritchallo, Erik Vermij, Koen Bertels, Zaid Al-Ars (2016), The Fidelity Slider: A User-Defined Method to Trade off Accuracy for Performance in Canny Edge Detector, In 11th HiPEAC conference p.1-6.