NGA Kuijpers, D Solis Escalante, L Bosman, MA van den Broek, JT Pronk, JM Daran, PAS Daran-Lapujade (2013), A versatile, efficient strategy for assembly of multi-fragment expression vectors in Saccharomyces cerevisiae using 60 bp synthetic recombination sequences, In Microbial Cell Factories Volume 12 p.1-13.

D Gonzalez Ramos, MA van den Broek, AJA van Maris, JT Pronk, JM Daran (2013), Genome-scale analyses of butanol tolerance in Saccharomyces cerevisiae reveal an essential role of protein degradation, In Biotechnology for Biofuels Volume 6 p.1-18.

MA van den Broek, S de Kok, JF Nijkamp, B Oud, F Roque, D de Ridder, JM Daran, JT Pronk, AJA van Maris (2013), Laboratory evolution of new lactate transporter genes in a jen1¿ mutant of Saccharomyces cerevisiae and their identification as ADY2 alleles by whole-genome resequencing and transcriptome analysis, 5th Conference on Physiology of Yeast and Filamentous Fungi.

NGA Kuijpers, D Solis Escalante, L Bosman, MA van den Broek, JT Pronk, JM Daran, PAS Daran-Lapujade (2013), Recombination-based cloning in yeast: a breakthrough technology, 5th Conference on Physiology of Yeast and Filamentous Fungi.

JF Nijkamp, MA van den Broek, JMA Geertman, MJT Reinders, JM Daran, D de Ridder (2012), De novo detection of copy number variation by co-assembly, In Bioinformatics Volume 28 p.3195-3202.

K Nijkamp, W Winterbach, MA van den Broek, JM Daran, MJT Reinders, D de Ridder (2010), Integrating genome assemblies with MAIA, In Bioinformatics Volume 26 p.433-439.

TA Knijnenburg, JM Daran, MA van den Broek, PAS Daran-Lapujade, JH de Winde, JT Pronk, MJT Reinders, LFA Wessels (2009), Combinatorial effects of environmental parameters on transcriptional regulation in Saccharomyces cerevisiae: A quantitative analysis of a compendium of chemostat-based transcriptome data, In BMC Genomics Volume 10 p.1-20.

TA Knijnenburg, JM Daran, MA van den Broek, PAS Lapujade, JH de Winde, JT Pronk, LFA Wessels, MJT Reinders (2008), Combinatorial effects of environmental parameters on transcriptional regulation in Saccharomyces cerevisiae: A quantitative analysis of a compendium of chemostat-based transcriptome data, Poster + Abstract at Yeasterday.

TA Knijnenburg, JM Daran, MA van den Broek, PAS Lapujade, JH de Winde, JT Pronk, LFA Wessels, MJT Reinders (2008), Combinatorial effects of environmental parameters on transcriptional regulation in Saccharomyces cerevisiae: A quantitative analysis of a compendium of chemostat-based transcriptome data., Abstract at Fifth Symposium KC for Genomics of Industrial Fermentation.