Mark G. Young, Timothy J. Straub, Colin J. Worby, Hayden C. Metsky, Andreas Gnirke, Ryan A. Bronson, Lucas R. van Dijk, Christopher A. Desjardins, Ashlee M. Earl, More Authors (2024), Distinct Escherichia coli transcriptional profiles in the guts of recurrent UTI sufferers revealed by pangenome hybrid selection, In Nature Communications Volume 15.

Colin J. Worby, Henry L. Schreiber, Timothy J. Straub, Lucas R. van Dijk, Ryan A. Bronson, Benjamin S. Olson, Jerome S. Pinkner, Chloe L.P. Obernuefemann, Vanessa L. Muñoz, More Authors (2022), Longitudinal multi-omics analyses link gut microbiome dysbiosis with recurrent urinary tract infections in women, In Nature Microbiology Volume 7 p.630-639.

Lucas R. van Dijk, Bruce J. Walker, Timothy J. Straub, Colin J. Worby, Alexandra Grote, Henry L. Schreiber, Christine Anyansi, Amy J. Pickering, Scott J. Hultgren, Abigail L. Manson, Thomas Abeel, Ashlee M. Earl (2022), StrainGE: a toolkit to track and characterize low-abundance strains in complex microbial communities, In Genome biology Volume 23.