Michael Hawrylycz, Maryann E. Martone, Giorgio A. Ascoli, Jan G. Bjaalie, Hong Wei Dong, Satrajit S. Ghosh, Jesse Gillis, David R. Haynor, Boudewijn Lelieveldt, More Authors (2023), A guide to the BRAIN Initiative Cell Census Network data ecosystem, In PLoS biology Volume 21.

Yun Zhang, Jeremy A. Miller, Jeongbin Park, Boudewijn P. Lelieveldt, Tamim Abdelaal, Oleh Dzyubachyk, Ed S. Lein, Richard H. Scheuermann, More Authors (2023), Reference-based cell type matching of in situ image-based spatial transcriptomics data on primary visual cortex of mouse brain, In Scientific Reports Volume 13.

Olaf M. Neve, Yunjie Chen, Qian Tao, Stephan R. Romeijn, Nick P. de Boer, Willem Grootjans, Boudewijn P.F. Lelieveldt, Jeroen C. Jansen, Marius Staring, More Authors (2022), Fully Automated 3D Vestibular Schwannoma Segmentation with and without Gadolinium-based Contrast Material: A Multicenter, Multivendor Study, In Radiology: Artificial Intelligence Volume 4.

Vincent van Unen, Laura F. Ouboter, Na Li, Mette Schreurs, Tamim Abdelaal, Yvonne Kooy-Winkelaar, Guillaume Beyrend, Thomas Höllt, P. W.Jeroen Maljaars, M. Luisa Mearin, Ahmed Mahfouz, Anne M.C. Witte, Cornelis H.M. Clemens, Sunje Abraham, Johanna C. Escher, Boudewijn P.F. Lelieveldt, M. Fernanda Pascutti, Andrea E. van der Meulen – de Jong, Frits Koning (2022), Identification of a Disease-Associated Network of Intestinal Immune Cells in Treatment-Naive Inflammatory Bowel Disease, In Frontiers in Immunology Volume 13.

A. Vieth, A. Vilanova, B. Lelieveldt, E. Eisemann, T. Höllt (2022), Incorporating Texture Information into Dimensionality Reduction for High-Dimensional Images, L. O'Conner (Eds.), In Proceedings - 2022 IEEE 15th Pacific Visualization Symposium, PacificVis 2022 p.11-20, IEEE .

Thomas P. Brouwer, Natasja L. de Vries, Tamim Abdelaal, Zheng Li, Dina Ruano, Arantza Fariña, Boudewijn P.F. Lelieveldt, Hans Morreau, Alexander L. Vahrmeijer, More Authors (2022), Local and systemic immune profiles of human pancreatic ductal adenocarcinoma revealed by single-cell mass cytometry, In Journal for ImmunoTherapy of Cancer Volume 10.

A. Popa, F. Gabrieli, T. Kroes, A. Krekeler, M. Alfeld, B. Lelieveldt, E. Eisemann, T. Höllt (2022), Visual Analysis of RIS Data for Endmember Selection, R. Pintus, F. Ponchio (Eds.), In Proceedings Eurographics Workshop on Graphics and Cultural Heritage p.103-106, The Eurographics Association.

Brian Aevermann, Yun Zhang, Mark Novotny, Mohamed Keshk, Trygve Bakken, Jeremy Miller, Rebecca Hodge, Boudewijn Lelieveldt, Ed Lein, Richard H. Scheuermann (2021), A machine learning method for the discovery of minimum marker gene combinations for cell type identification from single-cell RNA sequencing, In Genome Research Volume 31 p.1767-1780.

Trygve E. Bakken, Nikolas L. Jorstad, Qiwen Hu, Wei Tian, Brian E. Kalmbach, Jeroen Eggermont, Brian D. Aevermann, Thomas Höllt, Boudewijn P. Lelieveldt, More Authors (2021), Comparative cellular analysis of motor cortex in human, marmoset and mouse, In Nature Volume 598 p.111-119.

Hessam Sokooti, Sahar Yousefi, Mohamed S. Elmahdy, Boudewijn P.F. Lelieveldt, Marius Staring (2021), Hierarchical Prediction of Registration Misalignment using a Convolutional LSTM: Application to Chest CT Scans, In IEEE Access Volume 9 p.62008-62020.